Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSAIETKKVVVEEIASKLKESKSTIIVDYRGLNVSEVTELRKQLREANVEFKVYKNTMTRRAVEQ-------AELNGLNDFLTGPNAIAFSTEDVVAPAKVLND------------------------------FAKNHEALEIKAGVIEGKVSTVEEVKALAE----LPSREGLLSML--------LSVLQAPVRNLALAAKAVAEQKEEQGA--
3JSY Chain:A ((9-221))
---MAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD-KVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADI
General information:
TITO was launched using:
RESULT:
Template:
3JSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56815 for 1068 contacts (-53.2/contact) +
2D Compatibility (PS) -17282 + (NN) -4664 + (LL) 296
1D Compatibility (HY) -10400 + (ID) 1650
Total energy: -90515.0 ( -84.75 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_3JSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JSY-query.scw
PDB file :
Tito_Scwrl_3JSY.pdb
: