Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEHYYSEKPSVKSNKQTWSFRLRNKDFTFTSDSGVFSKKEVDFGSRLLIDSFEEPEVEGGILDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELSNENAEQNGITN--VKIYQSDLFSNVDSAQTFASILTNPPIRAGKKVVHAIFEKSAEHLKASGELWIVIQKKQGAPSAIEKLEELFDEVSVVQKKKGYYIIKAKKV
1DUS Chain:A ((30-196))-------------------------------TDSGVFSYGKVDKGTKILVENVVV-DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIKGGYRVLKSKK-


General information:
TITO was launched using:
RESULT:

Template: 1DUS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1104 for 1316 contacts (-0.8/contact) +
2D Compatibility (PS) -16933 + (NN) 1269 + (LL) 1824
1D Compatibility (HY) 400 + (ID) 1600
Total energy: -16144.0 ( -12.27 by residue)
QMean score : 0.264

(partial model without unconserved sides chains):
PDB file : Tito_1DUS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DUS-query.scw
PDB file : Tito_Scwrl_1DUS.pdb: