Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTINQLIRKGRVSKVENSKSPALNKGYNSFKKEHTNVSSPQKRGVCTRVGTMTPKKPNSALRKYARVRLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGVENRAQGRSKYGTKKPKAK
2UU9 Chain:L ((5-122))
-PTINQLVRKGREKVRKKSKVPALK-------------GAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGT------
General information:
TITO was launched using:
RESULT:
Template:
2UU9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15521 for 787 contacts (-19.7/contact) +
2D Compatibility (PS) -12723 + (NN) -5498 + (LL) 916
1D Compatibility (HY) -10800 + (ID) 4450
Total energy: -48076.0 ( -61.09 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_2UU9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UU9-query.scw
PDB file :
Tito_Scwrl_2UU9.pdb
: