Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDPRDVLKRPVITERSADLMT-EKKYTFEVDVRANKTEVKDAVESIFGVKVDKVNIMNYKGKSKRVGRYTGMTSRRRKAIVKLTADSKEIEIFEA
2WWB Chain:K ((57-137))
-LDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPN-------------GTKKAYVRLTADYDALDIAN-
General information:
TITO was launched using:
RESULT:
Template:
2WWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17099 for 558 contacts (-30.6/contact) +
2D Compatibility (PS) -8511 + (NN) -64 + (LL) 876
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: -32448.0 ( -58.15 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_2WWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WWB-query.scw
PDB file :
Tito_Scwrl_2WWB.pdb
: