Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNALVAHNSKAWDKKVETGNEWTVAVEQQVIEQAKKGNWDIRVTPMKDVPKDWFPPIKGLKVLCLASGGGQQGPVLAAAGADVTVLDNSEKQLNQDRMIAERDGLTIHTVKGSMDDLSVFNDESFDVIVHPVANVFVEN--VLPVWKEAYRVLKRNGILISGFVNPVVFLFDTELEQQGVLKVKHSIPYADPEDLPKHKVKKLIENNEALEFGHSLEDQIKGQIDAGFIVTGFYEDKGGF--VLD-QYIHTYSATRSVKV |
3M70 Chain:A ((115-286)) | ----------------------------------------------------AAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAA-NI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVP----------------------------------CPLPFSFTFAENELKEYYKDWEFLEYNENMGELHKTDENGNRIKMKFATMLARKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67410 for 1175 contacts (-57.4/contact) +
2D Compatibility (PS) -17276 + (NN) -3799 + (LL) 5928
1D Compatibility (HY) -1600 + (ID) 1350
Total energy: -85507.0 ( -72.77 by residue)
QMean score : 0.265
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