Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MNNSFTLKQQWFGNIRKDILAGILVALALIPEAIGFSIIAGVDPMVGLYASFCIAIIISIFGGRPGMISAATGSMAVVMVSLVADHGLQYLFAATILTGIIQVILGISKIARLMKFIPRSV----MIGFVNALAILIFSAQLPQFEGASWSMYAMLAGSLVIIYVLPRFTTAVPSPLVAIIVMTIIAVTFHVDVRTVGDMGNISSSLPHFLIPDVPFTFETLQIIFPYSIALAFVGLLESLLTAQIIDEMTDTDSDKNKESRGQGIANIVTGFFGGMA------------GCAMIGQSVINTKAGGRGRLSAFVAGAFLMFLIAVLSHVVVKIPMAALVAVMVMVSVGTFDWSSLKGLKKAPLTDSIVMVVTVVTVVVTDDLSKGV-FVGVLLSAVFFVAKISKLKIVSHAEDQKLRTYQVKGQIFFA------SVTDLTNAFIYQEDIERVVIDLTEAHVWDD-SGAAALDKIVAKFKEQGIEAELKGLNKASKSLMKQMA |
| 1KWH Chain:A ((1-492)) | KEATWVTDKPLTLKIHMHFR-DKWVWDENWPVAKESFRLTNVKLQSVANKAATNSQEQFNLMMAS--GDLPDVVGGDNLKDKFIQYGQEGAFVPLNKLIDQYAPHIKAFFKSHPEVERAIKAPDGNIYFIPYVPDGVVARGYFIREDWLKKLNLKPPQNIDELYTVLKAFKEKDPNGNGKADEVPFIDRHPDEVFRLVNFWGARSSGSDNYM-------DFYIDNGRVKHPWAETAFRDGMKHVAQWYKEGLIDKEIFTRKAKAREQMFGGNLGGFTHDWFASTMTFNEGLAKTVPGFKLIPIAPPTNSKGQRWEEDSRQKVRPDGWAITVKN----KNPVETIKFFDFYFSRPGRDISNFGVPGVTYDIKNGKAVFKDSVLKSPQPVNNQLYDMGAQIPIGFWQDYDYERQWTTPEAQAGIDMYVKGKYVMPGFEGVNMTREERAIYDKYWADVRTYMYEMGQAWVMGTKDVDKTWDEYQRQLKLRGLYQVLQMMQQAYDRQYKN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -374338 for 3747 contacts (-99.9/contact) +
2D Compatibility (PS) -48585 + (NN) -6634 + (LL) 1964
1D Compatibility (HY) 6000 + (ID) 2400
Total energy: -423993.0 ( -113.16 by residue)
QMean score : 0.227
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