Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGSLSEHKAGNRRFTLYLPPSYSTDSGGFPAVYVQDGSSLFQN--Q-I---ELLESAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGYHYLSDITNQFIPLIEENWNVTREPQSRGMIGASLGGLISMFAILKYPSMFGKIGSISGSYWYENAA------ET---------------------IHIS---SLK---PGTARVFMSIGSEEGREK------QS-IQRHMLKKTKQVHQSLKEKGF-TEDQLCLSIEKGAVHHHKYFCKQFINALEWLYGKNRSTL |
4MQL Chain:A ((32-283)) | ----------------------------GPHAVYLLDGLRAQDDYNGWDINTPAFEEYY----QSGLSVIMPVGGQS-SFYTDWYQPSQ---S-NGQNYTYKWETFLTREMPAWLQANKGVSP--TGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSEGWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYSGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADGGRN---GVFNFPPNGTHSWPYWNEQLVAMKADIQHVLN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81349 for 1639 contacts (-49.6/contact) +
2D Compatibility (PS) -21701 + (NN) -8611 + (LL) 1680
1D Compatibility (HY) -3200 + (ID) 1650
Total energy: -114831.0 ( -70.06 by residue)
QMean score : 0.398
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