Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDKTYEVTVPTDKIAITGSVESMEDAKLLDVH--PQGAISFSGKFPDMFKDITDKAEPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHI---S-SNWKENMMLLAQLTGKE--KKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKA-AKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPL---AQGGTAWSKVRFLKAAAEKLTQN
4JCC Chain:A ((3-285))----------------------------------APTEVTIKSSLDEVKLSKVPEKI-VTFDLGAADTIRALGFAKNIVGMPTKT--VPTYLKDLVGTVKNVGSMKEPDLEAIAALEPDLIIASPRT-QKFVDKFKEIAPTVLFQASKDDYWTSTKANIESLASAFGETGTQKAKEELAKLDESIQEVATKNES--SDKKALAILLNEGKMAAFGAKSRFSF-LYQTLKFKPTDTKFEDSRHGQEVSFESVKEINPDILFVINRTLAIGGDNSSNDGVLENALIAETPAAKNGKIIQLTPDLWYLSGGGLESTKLM--IEDIQKAL---


General information:
TITO was launched using:
RESULT:

Template: 4JCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36443 for 2241 contacts (-16.3/contact) +
2D Compatibility (PS) -29499 + (NN) -18024 + (LL) 3252
1D Compatibility (HY) -8800 + (ID) 3000
Total energy: -92514.0 ( -41.28 by residue)
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_4JCC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JCC-query.scw
PDB file : Tito_Scwrl_4JCC.pdb: