Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNKPTLYWSLLMFKDWNFYIASTLKGLVFVGSQNKPIEELFEWARKRFPGSLLVEDDDKLEPYAVEITQYLEGKRKNFTVPVEY-AGTQFQLAVWNALCEIPYGQTKSYSDIANDINKPAAVRAVGAAIGANPVLITVPCHRVIGKNGSLTGYRGGFEMKTLLLDLEKRASSEMDVPH
1WRJ Chain:A ((1-150))
------MIVYGLYKSPFGPITVAKNEKGFVMLDFCDCAERS--------------SLDNDYFTDFFYKLDLYFEGKKVDLTEPVDFKPFNEFRIRVFKEVMRIKWGEVRTYKQVADAVKT--SPRAVGTALSKNNVLLIIPCHRVIGE-KSLGGYSRGVELKRKLLELEGIDV-------
General information:
TITO was launched using:
RESULT:
Template:
1WRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98024 for 1149 contacts (-85.3/contact) +
2D Compatibility (PS) -15890 + (NN) -6670 + (LL) 1556
1D Compatibility (HY) -14800 + (ID) 2300
Total energy: -136128.0 ( -118.48 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_1WRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WRJ-query.scw
PDB file :
Tito_Scwrl_1WRJ.pdb
: