Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNVNQNKKVLFLTDIENGLEPILQEATNTSAENMLTIQSYGASISHPYGEIMRSVIFAIYQEDVEEIFVVGTKDKKTSAGNGLT-QLETMKDKIQTLDYLFQNCKPEFLGGTVDEWLNENSSDTIEKSVDMIRHHPLVPS------YVKVRGLFVNHKGGKPSIAEVPDVKTGQAMPDHCLS |
3QY1 Chain:A ((34-199)) | --QAQKPRFLWIGCSDSRVPAE--RLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHSGCGGIKAAVENPELGLINNWLLHIRDIWLKHSSLLGKMPEEQRLDALYELNVMEQVYNLGHSTIMQSAWKRGQNVTIHGWAYSINDGLLRDLDVTAT------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51589 for 1226 contacts (-42.1/contact) +
2D Compatibility (PS) -16516 + (NN) 529 + (LL) 872
1D Compatibility (HY) -7600 + (ID) 950
Total energy: -75254.0 ( -61.38 by residue)
QMean score : 0.324
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