Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLAFLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLDSYLPISCTLQLTNACNLSCSFCYASSGKP--YPEELSSEQWILVMQKLAAHGVADITLTGGEAKLIKG---FKELVVVASSL-FTNVNVFSNGLNWRDEEVELLSHLGNVSVQISIDGMD-NTHDQLRG--RKGGFKESMNTIKKLSEANIP-VIVAMTINE-SNADEVSDVVEQCAN------AGAFIFRAGKTLSVGRATEGFKALDIDFEEMVQIQLREARHKWGDRLNIIDWEHEESSFTTDFCTPGYLAWYIRADGYVTPCQLEDLPLGHILEDSMADIGSPARLLQLKCEAKNCKCIGKIELSEPDLPFQKEVKAGIQE |
| 4RTB Chain:A ((97-313)) | ---------------------------------------------------------------------------------------------------------VLFAPLYLSNICINNCSYCSFRRENKELSRVRLSLEEAVDEAKAIREMGHTRILLVMGEEPEDKTLSYLEEIIPAIYSEVDI-RRINVNIAPLTLKGYERLKKLKIGTYQLFQESYNPEVYREVHLDGPKTNFLWRLNAVERAIEAGIDDIGIGALFGLGDPLFELLGVIAHADYLKKKFGIGPHTVSVPRLKPA------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58598 for 1300 contacts (-45.1/contact) +
2D Compatibility (PS) -19363 + (NN) -9889 + (LL) 16248
1D Compatibility (HY) -2400 + (ID) 1600
Total energy: -75602.0 ( -58.16 by residue)
QMean score : 0.428
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