Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGKGTVVDVDGKKMNVYQEGSGKDTFVFMSGSGIAAPAYEMKGLYSKFSKENKIAVVDRAGYGYSEVSH----DDRDIDTVLEQTRKALMKSGNKPPYILMPHSISGIEAMYWAQKYPKEIKAIIAMDIGLPQQYVTYK-LSGVDRLKVRGFHLLTSIGFHRFIPSAVYNPEVIRQSFLTDEEKEIYKAINFKQFFNADMEHELLQSYQNGSKSVNLPAPKETPVLILDAVSDQNRHSKYAIQNRKDYEAFAAQFNT-ADI-KELRGTHSIYLYQPDQIYKLSMEFMRKVR |
| 5CBK Chain:A ((5-267)) | ---------------------------------------------------GSAHNVTVLGSGETTVVLGHGFGTDQ--SVWKYLVPHLTDDYRVLLYDNMGAGTTDPNLYDFERYSSLEGHSQDLIAILEEFHVT-KCIFVGHSLSSMVGAVSSIFRPDLFRKIVMISACPRVANADDYYGGFEEEDVNQLYGAMEE-NFQTMMTGYAP-I--VVGGDLESEAMQEFSRTLFN--MRPDIALSICRMISGYDLRPYLGL-VVIPCHIIQSSKDKLV-----PVAVA--EYLHRNFGGKSVVELIPTEGHLPHLSAPDITIPVLIRHINQD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48478 for 2216 contacts (-21.9/contact) +
2D Compatibility (PS) -27718 + (NN) -10720 + (LL) 6308
1D Compatibility (HY) -4000 + (ID) 1850
Total energy: -86458.0 ( -39.02 by residue)
QMean score : 0.435
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