Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------MKRMIVRMTLPLLIVCLAFSSFSASARA-ASEEKYWDHWIERHAQPLDASNASNK---DLRFLKKVLKGK---RIV----QLGETTHGAGEINATKVRMIKY-----------------------LHEEL-----GYDVLAFESGFPDTNASYLNMDQLTPKSTMKNSIYAVW-----HTEDVVELFDYMKE-----------------------QKEKGDPLILTGFDIQS----MKNSFNVAAT------QWVKAVDPEKAE----LLSQSENDFST-----------------------LVTDSNTFDEFSQKKEKLVKNYQKLIKFTKTHASELKENLPKEPKAYEMFMHSL-----QLRIDVMETYMLEEMKEKLEE--------------YPENI----EDFSFFMRDRMMAEQFQWVADTLYPKKKIIVWGHNYHLR---------KQNTKMIKDWVQL---NGPNMGDYLPERLKKQTYTIGIYA---YSGASLDSSDNKTVKPVTSPPPSGSLEALLKA-ADRPAVFVDFLHTKNKK--GTSWMYTPR----TALYWGYMEEQMILKEQYDG--------VIWLEHIT--PSVIIK---
4M1K Chain:A ((6-688))EYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIAAVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLKREFKVDANVGKPQVAYRETITKPVDVEGKFIRLTGGRGQYGHVKIKVEPLPR----GSGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIG--FPVVDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLI


General information:
TITO was launched using:
RESULT:

Template: 4M1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1797 -99143 -55.17 -225.33
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -55.17
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.046

(partial model without unconserved sides chains):
PDB file : Tito_4M1K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M1K-query.scw
PDB file : Tito_Scwrl_4M1K.pdb: