Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIHLSILDQAPVSKGESPVTTLQHSVELAQLSEQWGYKRYWFAEHHSTKGLASTAPEIMIARIAAQTNTIRVGSGGVLLPQYSPFKVAETFRQLEALYPNRIDLGVGRSPGGTTKTRLALTDGVK--------------KSLTEFNRQLQDVSYFLTDSLP-PDHPY---AGIKAAPLI--GTAPELWVLGLGENSARRAAHQGIGYVFGHFINPER-GENAFRIYRESFRPSAHF-SNPSALFTIFVICAKTDEEAEELALSQDLWLLRVGKGL-D--SRVPSI--EEAK---A-HPYTASDKKLIEEN-RKRMVIGSPTTVKQQLLDLTGCYETNEIMVLCNVFDFEAKKESYERLAELFL
1EZW Chain:A ((3-344))EVSFGIELLPD--------DKPTKIAHLIKVAEDNGFEYAWICDHYNN-----YSYMGVLTLAAVITSKIKLGPGITNPYTRHPLITASNIATLDWISGGRAIIGMGPGDK---ATFDKMGLPFPCKIPIWNPEAEDEVGPATAIREVKEVIYQYLEGGPVEYEGKYVKTGTADVKARSIQGSDIPFYMGAQGPIMLKTAGEIANGVLVNA-SNPKDFE-VAVPKIEEGAKEAGRSLDEIDVAAYTCFSIDKDEDKAIEATKIVVAFIVMGSPDVVLERHGIDTEKAEQIAEAIGKGDFGTAIGLVDEDMIEAFSIAGDPDTVVDKIEELL-KAGVTQVVVGSPIG--PDKEKAIELVGQEVI


General information:
TITO was launched using:
RESULT:

Template: 1EZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1764 -156235 -88.57 -503.98
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -88.57
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_1EZW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EZW-query.scw
PDB file : Tito_Scwrl_1EZW.pdb: