Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTND-MKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGYEADGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYV---FERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPN---VPEIIPTYEIRKLEELYHILNIENTVSC
3SMV Chain:A ((3-237))LTDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNES-PQQ-TETPGALYQDILRAVYDRIAKEWGLEPDAA-EREEFGTSV-KNWPAFPDTVEALQYLKKHYKLVILSNIDRNEF--KLSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKA-GIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHG--HVPSRMPNVDFRFNSMGEMAEAHKQA-----


General information:
TITO was launched using:
RESULT:

Template: 3SMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1130 -110225 -97.54 -498.75
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -97.54
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_3SMV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SMV-query.scw
PDB file : Tito_Scwrl_3SMV.pdb: