Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKI-KADSAGIGGWHIGNPPHEGTQEILRREGISFDGMLARQVSEQDLDDFDYIIAMDAENIGSLRSMAGFKNTSHIKRLLDY----------VEDSDLADVPDPYYTGNFEEVCQLIKTGCEQLLASIQKEKQL
1D2A Chain:B ((7-153))-ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKINHK-GKQIKTKHFDEYDYIIGMDESNINNLKKIQPEGSKAKVCLFGDWNTNDGTVQTIIEDPWYGDIQDFEY--NFKQITYFSK----------------


General information:
TITO was launched using:
RESULT:

Template: 1D2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 728 -69517 -95.49 -511.15
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -95.49
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_1D2A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D2A-query.scw
PDB file : Tito_Scwrl_1D2A.pdb: