Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTE------DASRMEAM-SLDYFLSYPRLFWPKFKELFQMKMSGSFEPNEGHLLLAELEKQGKQVDIFTQNIDGLHKKAGSRHVYELHGSIQTAACPACGARYDLP----HLLEREVPECTAAGNNGDICGTVLKTDVVLFGDAV---MHFDTLYEKLDQADLLLVIGTSLEVAPARFVPEDASLIPGMKKVIINLEPTY-----------CDSLFDMVIHQKIGEFARSLGMKK
4IF6 Chain:A ((14-270))IEDAVKLLQECKKIIVLTGAGVSVSCGIPDFRSRDGIYARLAVDFPDLPDPQAMFDIEYFRKDPRPFFKFAKEIY----PGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAGIQRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPL--AIMKPEIVFFGENLPEQFHRAMKYDK-DEVDLLIVIGSSLKVRPVALIP--SSIPHEVPQILINREPLPHLHFDVELLGDCDVIINELCHRLGGEYAK------


General information:
TITO was launched using:
RESULT:

Template: 4IF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1152 -135468 -117.59 -583.91
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -117.59
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_4IF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IF6-query.scw
PDB file : Tito_Scwrl_4IF6.pdb: