Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGIAGTFIFMIVIGAAIGAVTNHLAIQMLFRPYKAYYLFGKRVPFTPGLIPRRRDELA----KQMGLMVVNHLLTPEGIKKRLVS-DAAKTQALRVGEQLIQKLSLSEVTVKEALEKAGMKRPEKAADAWISSW-TDDKLHELFRQYGDQSL--KELVPIEVQEKLEEKIPMISGYILSRSVRYFESDEGKIRLGNMIDDFLKERGMLGSMVQLFLGNSSLADR-VLPELLKFLRNEETNKLLSDLLKNEWGKLR-EYTFNEADEKWNAKA---LIFSLK-RRVLQAFSTAPFFNNTIGTLTVRYESELTQQMLPALLDKLLEGISSNLESVLKRLRLEEIVKEQVDQFPVERLEEMVLSISKKEFKMITYLGGLLGGIIGAIQALFVILF
4QIK Chain:A ((4-313))----------------GVEDTKHYEEAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIR---AMRAARSLGERTVTELILQHQ-NPQQLSSNLWAAVRARGCQ----FLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQAS------------------------------KTSIGHVVQLLYRASCFKSLMQLKEEFR------TYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRT---------------GDPANLNRLRPHLELLANIDPSPDAPP---------PTWEQLENGLVAVRTVVHGLVDYIQNH-----


General information:
TITO was launched using:
RESULT:

Template: 4QIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1184 -101717 -85.91 -353.18
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -85.91
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.329

(partial model without unconserved sides chains):
PDB file : Tito_4QIK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QIK-query.scw
PDB file : Tito_Scwrl_4QIK.pdb: