Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKKLLAFALCTGAYAALFAYSVNSEQKTATSEMTDVSRLMPVKIKQTVKGQEEEMLIDTVKEANRKNIKISIAGAQHSMGGHTYY----EDGIVLDMTGYNKILSLDQEKKTIRVQSGATWNDIQKYVNPYG--LAVKVMQSQNIFTIGGSLSANAHGRD-IRYGSLIDTVKSFRLLKADGMIITVTPK-DDLFTAVIGGY-GLFGVILDVTLELTDDELYVMKTEKMNYSTYSDYFSKHVKGNPDVRMHLARISTAKKGFLKDMYVTNYVLANHQDQLSSYSELKEDEYTGATKFALGLSRRYEWGRNWLWDTQQSYFLSQNGTEISRNNVMRSESKFLEYENNDNTDVLQEYFVPVKEYGSYIDDLRQTLSDEDLNLLNITIRYVQKNEKADLSYAKDDMFSLVLLINEGFSKEDQADTARIIRRMTDVAIKHGGSYYLPYMTYQTKAQMRQAYPKSEAFFQKKRTYDPDERFMNYFYQRYK
4PVK Chain:A ((50-227))-----------------------------------------NVKPLYIITPTQVSHIQSAVVCGRRHTVRIRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAV-WVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPA-GVCPTVGVGGHFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4PVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 912 -115375 -126.51 -682.69
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -126.51
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_4PVK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PVK-query.scw
PDB file : Tito_Scwrl_4PVK.pdb: