Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence --MKRNGIVSALCFIGFLAAEAPDI--SVAEALVLLS-----------ILFFVPGIFPFVFRQSPVRAAQFMENGLIQCYPVAAFF----AVLALVTEVGGFALIWWMY------TVFNALYAILR-----------------LWETKIHRIEETSVL--FGLIYLAGGGF-----WFFAYAAHLQIM-------------------------------------QFGPLI-----ILLTAVHFHYS-----------------AFLIPIFNGLLGRTIRKHRMLYSWITW-----VILLSP---------LLIALGITYSKTLDVIA---VSIYMAAIYL-HAFLVFTAAFRTKTGTFLIRLSSAVLMITI------------------------AFSMIYSFGVFRQEVTLTINQMIWIHGFVNAFGVIL--------PALIGWRIEDAKPFDADSVKTFSRIYG-----------KRKIGEEFLANIQAENNA----RYSGLVDDM-----GSLRSKDFSPEKLAPLILSFYEQTIE---YNIKAKVTWSTWFRPLAIIY-------EWFSRRIGQIHLSTNPDWYR------------MYSKI------KGVHSKKDGRERVRAWIR--TNEKNETIF--TALYSVYRSNGEGYMNISLP------LPFSSMTGILKPYHHQEKLVLTSRRRKSRAGDE--------------GIYLQTRAGTCPLPLSETFLIEAVHDNKLTAVHHMWLFGIKFLTVHYSITHINQPIERT---- 5C2V Chain:A ((1-781)) EPVMTGGPVQGKALWTDYSGMSKEVQGPVSQILFTQSPRTAKGDPYQNYPHYIPEGSRIVLFDLNTKELKVLTNDFATAFDPCTYWDGKKFAFAGVHKKGGGCQIWEMNIDGSGLRQMTDLKGTCRSPIYYAAGSIEEGEGRIIWRDREGDWKEHGMVEKTGMIIFSGSPEGVMDEFHNPYAYNLYRLDTQGGKIIQRITGHVLSGIEFPHLNTTIDQITYNLSSNFDPWLTPDGNILFSSVQANGSRAGGEGRVMICVDNWDGAYPRPIYGNCDGEIGGTSGRSQAKITFGDRKIVYVESPYMNWGVGQLAAVSWDAPFNKTYEKLTGKDGGLYRSPYPLPDDRMLVSYAERGDFGIYWFNFSKCAAGDKVYDDPNWNDHQPAPVYVKYKPRWINTFTAGKNFGV--TVVTYQPFDQVKVEGYPHSWGTWICFDTTLSDQPVGPYPHQKAKNVSHGDIKAVRIIQGYQCVEPDSTRFRVGAGAHLLGGERSSSNSGTAFQQRGIIGYQYVESDGSTVTSQLSD-------VPYYMQILDDKGMSVQTALTWA-YLRPYHGRICSGCHYGSYRGRAFKNIHAKALYNWWYDDRSHYDSPFAFRYLKFDNDGNYKGVKHGEDVVGTTSQPVEGLTLDKQRTVDFRRDIQPILDAKCAMCHDSNNPPNLGGGLELVSVDGIAAYSRAYNSLLEPQRGKDPNIGGKYVNPSAAINSLLVWRLYEAELSANAPREKIFPIEGRLLHNKFLTQDERYAI--VEWIDLGAQWDNIPGPDFYPGYLV

General information: TITO was launched using: RESULT: Template: 5C2V.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3181 -119339 -37.52 -223.48 target 2D structure prediction score : 0.27 Monomeric hydrophicity matching model chain A : 0.66 3D Compatibility (PKB) : -37.52 2D Compatibility (Sec. Struct. Predict.) : 0.27 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.046

(partial model without unconserved sides chains): PDB file : Tito_5C2V.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5C2V-query.scw PDB file : Tito_Scwrl_5C2V.pdb: