Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKKVRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAAESGIEDILIITGRNKRSIEDHFDRSAELEFNLREKGKTETLKEMQQIADLANIHYIRQKEPLGLGHAVLCAEHFIGDEPFAVLLGDDIMVSETPALRQLMD--VYDVYGTEVVGVQSVLPEDVSKYGIINTSGSQGHVYEVNDLVEKPSPEEAPSEIAVMGRYVLNSSIFSVLKTIGRGAGNEIQLTDALREVCRKEPIHARLLEGNRYDIGDKLGCFKASTEIGLMRPEMRSQLLAYLEDVIKRETKEMLR
1H5T Chain:B ((2-205))---KMRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILII------STPQDTPRFQQLLGDGSQWG--------------LNLQYKVQPSPDGLAQAFIIGEEFIGGDDCALVLGDNIFYGHD--LPKLMEAAVNKESGATVFAYHVNDPE---RYGVVEFDKNGTAI----SLEEKPL--EPKSNYAVTGLYFYDNDVVQMAKNLKPSARGELEITDINR-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1H5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 993 -67723 -68.20 -335.26
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -68.20
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.401

(partial model without unconserved sides chains):
PDB file : Tito_1H5T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1H5T-query.scw
PDB file : Tito_Scwrl_1H5T.pdb: