Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKKALIFTVIFGIIFLAVLLVSASIYKSAMAQKEEGHEAAAAEAKKETDLAHVDQVETFVGKEKYYVVKGTDKKGTALYVWVPADKKAKILSKEAKEGISEDKAAKIIKDEG------LVSKQKEVHLAREGN---------VLLWEVTYLDK---EG-------QYSLSYVDFTTGKILKNITP
5COZ Chain:A ((270-357))-----------------------------------------------------------------------------------------------TGEILHPSSILSKEVDKLKKYVTSGDIEVSEISLEYMLFADKNETYDIKPVWVVYYYQNQLVTGENSYTQKMALYDVYDAYTGEEYRI---


General information:
TITO was launched using:
RESULT:

Template: 5COZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 133 -1934 -14.54 -30.69
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -14.54
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.747

(partial model without unconserved sides chains):
PDB file : Tito_5COZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5COZ-query.scw
PDB file : Tito_Scwrl_5COZ.pdb: