Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEIAEVLPESMKNALSEIPEQQWLEIEEVRIRINR---PVELIRRGQPVYLSYAGTAEDAHLILSRLSNYSMYTLEEE--LKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQKLGIAEPLLPYLYQN---SWLNTLIIGPPQTGKTTLLRDLARLSSTGKKNMLPVKTGIVDERSEIAGCLRGIPQHQFGQRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRLWEERAFDRYLELSRAKGPGTVSQIYDKDGNVLSRTTGVKTC
4KSR Chain:A ((126-398))----------LINAMLGE---AIKEGASDIHIETFEKTLSIRFRVDGVLREVL-APSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISL--AVDVRVSTMPSS-HGERVVMRLLDK-----DLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSER-----NILTVEDPIEFDIDG--IGQTQVNPR----VDMTFARGLRAILR-QDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIE----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4KSR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1019 8748 8.58 37.55
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 8.58
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.379

(partial model without unconserved sides chains):
PDB file : Tito_4KSR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KSR-query.scw
PDB file : Tito_Scwrl_4KSR.pdb: