Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR----CNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFP------KNQSYKIFGNIPYNISTDIIRKIVFDSI-ADEIYLIVEYGFAKRLLN--T---KRSLALFLMAEVDISILSMVPREYFHPKPKVNSSLIRLNRKKS-RISHKDKQKYNYFVMKWVNKE---YKKIFTKNQFNNSLKHAGI---DDLNNISFEQFLSLFNSYKLFNK
3UZU Chain:A ((18-276))-----KRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G-ELLELHAGDALTFDFGSIARPGDEPSLRIIGNLPYNISSPLLFHLMSFAPVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPESFQPPPKVDSAIVRMIPHAPHELPAVDPAVLGEVVTAAFSQRRKMLRNTLGGYRDLVDFDALGFDLARRAEDIGVDEYVRVAQAVASAR-


General information:
TITO was launched using:
RESULT:

Template: 3UZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1064 8670 8.15 36.74
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 8.15
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_3UZU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UZU-query.scw
PDB file : Tito_Scwrl_3UZU.pdb: