Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDPSTLMILAIVAVAIIVLAVFFTFVPVMLWISALAAGVKISIFTLVGMRLRRVIPNRVVNPLIKAHKAGLNVGTNQLESHYLAGGNVDRVVNALIAAQRANIELTFERCAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMDGIEVKAKARITVRANIERLVGGAGEETIVARVGEGIVSTIGSSDNHKKVLENPDMISQTVLGKGLDSGTAFEILSIDIADVDIGKNIGAILQTDQAEADKNIAQAKAEERRAMAVAQEQEMRARVEEMRAKVVEAEAEVPLAMAEALREGNIGVMDYMNIKNIDADTEMRDSFGKLTKDPSDEDRKS
4FM3 Chain:A ((45-93))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTAESYKKARLLAEQAELDARLAESKVLTQKSKDQ--LGELDKSLKRLRKQ--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4FM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 13 -1235 -95.00 -25.20
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : -95.00
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.760

(partial model without unconserved sides chains):
PDB file : Tito_4FM3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FM3-query.scw
PDB file : Tito_Scwrl_4FM3.pdb: