Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKEYIFNAAEFLASQNIKALVIACNTATSIAIEDLRRNFDFPIIG-IEPAVKPAINKCTEERKRVLVVATNLTLKEEKFHNLVKEIDHHDLVDCLALPGLVEFAENFDFSEDKIIKYLKNELSSFDLKQYGT--------IVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQLGKGSGSITFFNSGHKIVDQEVISKYKRLFEILDETQRSHVGH
2W4I Chain:B ((1-195))MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYLN-ISHLATSLFVPLIEE---------SILEGELLETCMHYYFTPLEILPEVIILGCTHFPLIAQKIEGYF---------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2W4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 962 -79960 -83.12 -429.89
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -83.12
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_2W4I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W4I-query.scw
PDB file : Tito_Scwrl_2W4I.pdb: