Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDVSKNQEENISDTALTNELIHLLGHSRHDWMNKLQLIKGNLSLQKYD--RVFEMIEEMVIDAKHESKLS----N-------LKTPHLAFDFLTF----NWKTHYMTLEYEVLGEI-KDLSAYDQKLAKLMRKLFHLFDQAVSRE-SENHLTVSLQTDHPDRQLILYLDFHGAFADPSAFDDIRQNGYEDVDIMRFEITSHECLIEIGLD
4R39 Chain:A ((17-176))------------------TELDRQLAEVQHRVKNHLAMIVSMIRIQSSQAGGVGSQFDSLSRRVEALQLLYQEMDIAGAAKATDKIIPLGAYLGRIASAINHIDGRGAIKVNVQADTVDVPVETAGRIGLLVSEVLTNALQHAFSDRASGVVQLRSSVM-SGEQLRVTVEDDGRGIPED--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 567 1474 2.60 10.45
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 2.60
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.321

(partial model without unconserved sides chains):
PDB file : Tito_4R39.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R39-query.scw
PDB file : Tito_Scwrl_4R39.pdb: