Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIYGVYMDRPLSAGEEDRMMAAVSAEKREKCRRFYHKEDAHRTLIGDMLIRTAAAKAYG------------LDPAGISFGVQEYGKPYIPAL---------PDMHFNISHSGRWIVCAVDSKPIGIDIEKMKPGTIDIAKRFFSPTEYSDLQAKHPDQQTDYFYHLWSMKESFIKQAGKGLSLPLDSFSVRLKDDGHVSIELPDGHEPCFIRTYDADEEYKLAVCAAHPDFCDGIEMKTYEELL
3GWM Chain:A ((25-124))------------------VFAETFTPGERRDAADK--SSSAARHLAARWAAKEAVIKAWSSSRFSKRPALPEGIHRDIEVVTDMWGRPKVRLSGEIAKHLEDVTIHVSLTHEDQTAAAVA-----------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GWM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 214 -7324 -34.22 -92.70
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -34.22
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_3GWM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GWM-query.scw
PDB file : Tito_Scwrl_3GWM.pdb: