Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDQRRNVYFFHKQDQETNEQARSLTQLAEEHGFTVVNQHSDANIIASIGGDGTFLQAVRKTNF--RDDCLYVGITKKGKAHLYCDFHSDEREKMVDAMTFEQIEVRKYPLIEVTVDQ-----ASPFHCLNEVSIRSSIIKTFVMDVLIDDLHFETFRGDGMIISTPTGSTAYNKSVAGAVVDPLLPCMQVSELASLNNNTYRTLGSPFVLSSDRKLTLRVVQDGNEHPIIGLDNEALSTRNVKTIEIKLSNKKIKTVKLKDNSFWEKVKRTFL
2I2C Chain:A ((1-262))-----MKYMITSKGDEKSDLLRLNMIAGFGEYDMEY--DDVEPEIVISIGGDGTFLSAFHQYEERLD-EIAFIGIH-TGHLGFYADWRPAEADKLVKLLAKGEYQKVSYPLLKTTVKYGIGKKEATYLALNESTVKSS-GGPFVVDVVINDIHFERFRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVFPKHHVVSLQPVND--KDFQISVDHLSILHRDVQEIRYEVSAKKIHFARFRSFPFWRRVHDSFI


General information:
TITO was launched using:
RESULT:

Template: 2I2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1391 -1234 -0.89 -4.84
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -0.89
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_2I2C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2I2C-query.scw
PDB file : Tito_Scwrl_2I2C.pdb: