Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRIVFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEG----NALHGKELMLAVSTGSEAEKYQAGGANHYSISELLKPFQ-ATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQQPFV
4QOD Chain:B ((82-200))-------------------------------------------ASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDS-RYFLWPLQHGTLHFCGFKVLAPQISFAPEIASEEE-----------------


General information:
TITO was launched using:
RESULT:

Template: 4QOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 443 -26129 -58.98 -229.20
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : -58.98
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_4QOD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QOD-query.scw
PDB file : Tito_Scwrl_4QOD.pdb: