Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYA----ISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCG-SPASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK
4UXH Chain:B ((5-175))-------GRIELIIGPMFAGKTTELMRRVKREIHARRSCFVIKYSKD---------------LRAQAAVSQLTEVRDTWKRF----DVLAIDEGQFF-SDLVDFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVCMMCHEQPACFTRRTVNVEQQE------LIGGADMYIATCR-----------


General information:
TITO was launched using:
RESULT:

Template: 4UXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 745 -16008 -21.49 -106.01
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -21.49
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.367

(partial model without unconserved sides chains):
PDB file : Tito_4UXH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UXH-query.scw
PDB file : Tito_Scwrl_4UXH.pdb: