Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------MGKRFSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYH-----------------LEFTQYEGGSTAP---------VPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKGISGK
1BH5 Chain:A ((7-182))SGGLTDEAALSCCSDADPSTKDFLLQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPD---VYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIQILNPNKMATL


General information:
TITO was launched using:
RESULT:

Template: 1BH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 366 -1005 -2.74 -7.39
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -2.74
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_1BH5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BH5-query.scw
PDB file : Tito_Scwrl_1BH5.pdb: