Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPT-GTGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS
1C5F Chain:E ((21-170))-----------------------GRIVMELYNDIAPRTCNNFLMLCTGMA--GTGKISGKPL--HYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDE-EFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSG--QEVVTKIEYLKTNSKNRPLADVVI------


General information:
TITO was launched using:
RESULT:

Template: 1C5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45794 for 1106 contacts (-41.4/contact) +
2D Compatibility (PS) -15854 + (NN) -13259 + (LL) 1700
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -88757.0 ( -80.25 by residue)
QMean score : 0.618

(partial model without unconserved sides chains):
PDB file : Tito_1C5F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1C5F-query.scw
PDB file : Tito_Scwrl_1C5F.pdb: