Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVGAGQRRYQLAVDHSRAALLSAARTDAAAGAVITGAQRDRAWARRSTGTVLDEARSDTTVTAVMPIAQREAIRRRVARLRAQRAHVLTARRRARRHLAALRALRYRVAHGPGVALAKLRLPSPSGRAGIAVHAALSRLGRPYVWGATGP-------------NQFDCSGLVQWAYAQAGVHLDRTTYQQINEGIPVPRSQVRPGDLVFPHP---GHVQLAIGNNLVVEAPHAGASVRVSSLGNN---VQIRRPLSGR |
| 3PBI Chain:A ((108-239)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------ARQAVEYVIRRAGSQMGVPYSWGGGSLQGPSKGVDSGANTVGFDCSGLVRYAFAGVGVLIPRFSGDQYNAGRHVPPAEAKRGDLIFYGPGGGQHVTLYLGNGQMLEASGSAGKVTVSPVRKAGMTPFVTRII--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PBI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -54605 for 850 contacts (-64.2/contact) +
2D Compatibility (PS) -12474 + (NN) -7062 + (LL) 12944
1D Compatibility (HY) -8400 + (ID) 2000
Total energy: -71597.0 ( -84.23 by residue)
QMean score : 0.496
|
|
|