Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKKYGVKEKDQVVAHILNLLLTGKLRSGDRVDR-NEIAHGLGVSRVPIQEALVQLEHDGIVSTRYHRGAFIERFDVATILE---HHELDGLLNGIASARAAANPTPRILGQLDAVMRSLRNSKESRAFAECVWEYRRTVNDEYAGPRLHATIRASQNLIPRVFWMTYQNSRDDVLPFYEEENAAIHRREPEAARAACIGRSELMAQTMLAELFRRRVLVPPEGACPGPFGAPIPGFARSYQPSSPVP |
2EK5 Chain:A ((3-110)) | ------VPLYKQIASLIEDSIVDGTLSIDQRVPSTNELAAFHRINPATARNGLTLLVEAGILYKKRGIGMFVSAQAPALIRERRDAAFAATYVAPLIDESIHLGFTRARIHALL-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40763 for 629 contacts (-64.8/contact) +
2D Compatibility (PS) -11284 + (NN) -4993 + (LL) 9212
1D Compatibility (HY) -800 + (ID) 950
Total energy: -49578.0 ( -78.82 by residue)
QMean score : 0.412
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