Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAQATTAGSFNHHASTVLQGCRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVVPPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHLLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA |
| 1YAR Chain:O ((10-237)) | KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEG-IAKAAAEAHG----VIRNSTYGRAQAEKSP------EQLLGVLQRYQDLCHNVYCQAETIRTVIA------------IRIPEHKEEDNLGVAVQHAVLKIIDELEIKTL-GSGEKSG-SGGAPTPIGMYALREYLSARSTVEDKLLGGGSQS----------PSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYL--LNWKKLIQPRTGSDHMVS--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97240 for 1531 contacts (-63.5/contact) +
2D Compatibility (PS) -22702 + (NN) -3565 + (LL) 3084
1D Compatibility (HY) -5200 + (ID) 2250
Total energy: -127873.0 ( -83.52 by residue)
QMean score : 0.308
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