Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MSTRQAAEADLAG-------KAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDGMSRLSGYLTPQA-------------RATFEAVLAKLAAPG------ATNPDDHTPVIDTTPDAAAID----------------RDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDLQTGAGK--------GFTGGGTLL-PMADVIR----------MTSHAHHYSP---------------------------ASGRYPQ-AIFDHGTPLALYH-----------TKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQAHHVTAWTSTGRTDITELTLACGPDNRLAEKGWTTHNNTHGHTEWLPPPHLDHGQPRTNT-FHHPERFLHNQDDDDKPD---------------------------------- |
| 1F5A Chain:A ((20-498)) | YGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG--SYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHL--VPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESK-IRILVGSLEKNEFITLAHVNPQSFPAKEEFRTMWVIGLVFKDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2730 for 2022 contacts (-1.4/contact) +
2D Compatibility (PS) -33699 + (NN) -19376 + (LL) -40
1D Compatibility (HY) -6800 + (ID) 2300
Total energy: -64945.0 ( -32.12 by residue)
QMean score : 0.191
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