Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTPVILVAGQDHT--DEVTGALLR--R---TGTVVVEHRFDG-HVVRRMTATLSRGELITTEDALEFAHGCVSCTIRDDLLVLLRRLHRRDNVGRIVVHLAPWLEPQP-ICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSLGEDELPDGRTVAQVTVGQAEFADLLVLTHPEPVAVAVLRRLAPRARITGGVDRVELALAHLDDNSRRGRTDTPHTPLLAGLPPLAADGEVAIVEFSARRPFHPQRLHAAVDLLLDGVVRTRGRLWLANRPDQVMWLESAGGGLRVASAGKWLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADPTDIVNALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAGEFSAHRNSGESR |
2FFH Chain:A ((98-259)) | --RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGE----KVGVPVLEVMDGE--S--PESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELAR-------------LKEVLGPDEVLLVLDAMTGQEALS----------VARAFDEKV-GVTGLVLTKLD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109971 for 1080 contacts (-101.8/contact) +
2D Compatibility (PS) -15780 + (NN) -7524 + (LL) 15040
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -120385.0 ( -111.47 by residue)
QMean score : 0.278
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