Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPQARPARRADVRELSRTMARAFYDDPVMSWLLSNDNARTARLTRLFATIVRHQHLAGGGVEVARGAAGIGGAALWDPPDRWRESRRQQLAMTPGFLRVFGFRTAKARAALDVMMRVHPEEPHWYLAAIGSDPTVRGQGFGQVLMRSRLDRCDAEHCP-AYL--ESTKPENVPYYQRFGFRVTREIALPDAGPPLWAMWREPR
1Z4E Chain:A ((4-147))
-HVTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVS---YVR-AFKEIKK---DKNNELIVACNGEEIVGMLQVTFTPYLT----------------------------------YQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHE------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z4E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34485 for 960 contacts (-35.9/contact) +
2D Compatibility (PS) -14608 + (NN) -3979 + (LL) 5184
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -53888.0 ( -56.13 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_1Z4E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z4E-query.scw
PDB file :
Tito_Scwrl_1Z4E.pdb
: