Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVVTAAPAPPVVRLPPAV-RGPKLFQGLAFVV--SRRRLLGRFVRRYGKAFTANILMYGRVVVVADPQLARQVFTSSPEELGNIQPN-LSRMF--GSGSV-FALDGDDHRRRRRLLAPPFHG--KSMKNYETIIEEETLRETANWP--QGQAFATLPSMMHITLNAILRAIFGAGGSELDELRRL----IPPWVTLGS---RLAALPKPKRDYGRLSPWGRLAEWRRQYDTVIDKLIEAERADPNFADRTDVLALMLRSTYD------DGSIMSRKDIGDELLTLLAAGHETTAATLGWAFERLSRHPDVLAALVEEVDNGG-------------HELRQAAILEVQRARTVIDFAA-RRVNPPVYQLGEWVIPRGYSIIINIAQIHGDPDVFPQPDRFDPQRYIGSKP-----SPFAWIPFGGGTRRCVGAAFANMEMDVVLRTVLRHFTLETTTAAGERSHGRGVAFTPKDGGRVVMRRR |
| 3SWZ Chain:A ((12-452)) | ------------------SLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGT-KTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKI-F-PNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANV-DSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDD------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171154 for 3019 contacts (-56.7/contact) +
2D Compatibility (PS) -43238 + (NN) -23627 + (LL) 1780
1D Compatibility (HY) -21200 + (ID) 4250
Total energy: -261689.0 ( -86.68 by residue)
QMean score : 0.492
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