Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPFDDPQAELAWMFLQSLCEGGDLDEGFALLSNDFTYWSI-VTRTELDKKTFRRAVERRKQVF-EV-NIELIRCVNEGETVVVEGHCDGVS--------ADRTRYDSPFVCIFETRDGMIISLREYSDTQSLAEVYPVACATPGRC
1SJW Chain:A ((2-141))
-----SRQTEIVRRMVSAFNT-GRTDDVDEYIHPDYLNPATLEHGIHTGPKAFAQLVGWVRATFSEEARLEEVRIEERGPWVKAYLVLYGRHVGRLVGMPPTDRRFSGEQVHLMRIVDGKIRDHRDWPDFQGTLRQLGDPWPDDEG-
General information:
TITO was launched using:
RESULT:
Template:
1SJW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56802 for 901 contacts (-63.0/contact) +
2D Compatibility (PS) -13951 + (NN) -4854 + (LL) 60
1D Compatibility (HY) 800 + (ID) 1150
Total energy: -75897.0 ( -84.24 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1SJW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SJW-query.scw
PDB file :
Tito_Scwrl_1SJW.pdb
: