Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKACVVKELSGPSGMVYTDIDEVSGDGGKVVIDVRAAGVCFPDLLLTKGEYQLKLTPPFVPGMETAGVVRSAPSDAGFHVGERVSAFGVLGGYAEQIAVPVANVVRSPVELDDAGAVSLLVNYNTMYFALARRAALRPGDTVLVLGAAGGVGTAAVQIAKAMQAGKVIAMVHREGAIDYVASLGADVVLPLTEGWAQQVRDHTYGQGVDIVVDPIGGPTFDDALGVLAIDGKLLLIGFAAGAVPTLKVNRLLVRNISVVGVGWGEYLNAVPGSAALFAWGLNQ---LVFLGLRPPPPQRYPLSEAQAALQSLDDGGVLGKVVLEP |
4EYE Chain:A ((22-341)) | MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAK-VIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIG--AFDDAVRTLASEGRLLVV----------KVNRLLLRNASLIGVAWGEFLRTHADY---LYETQAGLEKLVAEGMRPPVSARIPLSEGRQALQDFADGKVYGKMVLV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4EYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -250667 for 2732 contacts (-91.8/contact) +
2D Compatibility (PS) -33107 + (NN) -17395 + (LL) 576
1D Compatibility (HY) -33600 + (ID) 9050
Total energy: -343243.0 ( -125.64 by residue)
QMean score : 0.569
|
|
|