Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRFLTSIVAWLRAGYPEGIPPTDSFAVLALLCR--RLSHDEVKAVANELMRLGDFDQIDIGVVITHFTDELPSPEDVERVRARLAAQGWPLDDVRDREEHA
4GIU Chain:A ((24-92))
---------------------VPSWPQILGRLTDNRDLARGQAAWAMDQIMT-GNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHP-----------
General information:
TITO was launched using:
RESULT:
Template:
4GIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18002 for 430 contacts (-41.9/contact) +
2D Compatibility (PS) -7468 + (NN) -7296 + (LL) 2364
1D Compatibility (HY) -400 + (ID) 500
Total energy: -31302.0 ( -72.80 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_4GIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GIU-query.scw
PDB file :
Tito_Scwrl_4GIU.pdb
: