Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTHR
1DUB Chain:F ((3-258))-NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANF---


General information:
TITO was launched using:
RESULT:

Template: 1DUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -132706 for 2097 contacts (-63.3/contact) +
2D Compatibility (PS) -27383 + (NN) -9120 + (LL) 404
1D Compatibility (HY) -24800 + (ID) 6450
Total energy: -200055.0 ( -95.40 by residue)
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_1DUB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DUB-query.scw
PDB file : Tito_Scwrl_1DUB.pdb: