Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGSATVEKRLDFGLLGPLQMTI-------DGTPVPSGTPKQRAVLAMLVINRNRPVGVDALITALWEEWPPSGARASIHSYVSNLRKLLGGAGIDPRVVLAAAPPGYRLSIPDNTCDLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERILRQQPLDAKKSAKTTAAGTVTVLDQRTMASGQQAVAYLHDIASGRGYPLQAAATRIGRLHDNDIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRSAVTLNDGDHIRICDHEFTFQISAGTHGGT |
| 2RV8 Chain:A ((148-246)) | ----------NVRLTFADIELDEETHEVWKAGQPVSL-SPTEFTLLRYFVINAGTVLSKPKILDHVWRYDF-GGDVNVVESYVSYLRRKIDTGE--KRLLHTLRGVGYVLREP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55263 for 547 contacts (-101.0/contact) +
2D Compatibility (PS) -9941 + (NN) -7152 + (LL) 20120
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -59286.0 ( -108.38 by residue)
QMean score : 0.489
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