Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASLLNART----AVITGGAQGLGLAIGQRFVAEGARVVLGDVNLEATEVAAKRLGGDDVA--LAVRCDVTQADDVDILIRTAVERFG-GLDVMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAA-AIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQKLAEVPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI |
| 4CQM Chain:H ((2-261)) | -ASQLQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLG-----NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130965 for 2124 contacts (-61.7/contact) +
2D Compatibility (PS) -25601 + (NN) -144 + (LL) 220
1D Compatibility (HY) -16800 + (ID) 5350
Total energy: -178640.0 ( -84.11 by residue)
QMean score : 0.548
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