Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLGNTIHVPCQPCRHGHGAPSRGLRGRPADRWPVARATPTLHVCPQNQGVGLDFVRKPEYGRLRWPAYPAGTNNDRLISMRDGGIVALPQLTDEQRAAALEKAAAARRARAELKDRLKRGGTNLTQVLKDAESDEVLGKM-KVSALLEALPKVGKVKAQEI-MTELEIAPTRRLRGLGDRQRKALLEKFGSA
4ITQ Chain:A ((14-103))
--------------------------------------------------------------------------------------------------ALEKAAAARRERAEVKNRLKHSGASLHEVIKQGQENDVIG-KMKVSALLESLPGVGKVRAKQIME-RLGISESRRVRGLGSNQIASLEREFG--
General information:
TITO was launched using:
RESULT:
Template:
4ITQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25690 for 558 contacts (-46.0/contact) +
2D Compatibility (PS) -10299 + (NN) -8259 + (LL) 4232
1D Compatibility (HY) -7200 + (ID) 2500
Total energy: -49716.0 ( -89.10 by residue)
QMean score : 0.747
(partial model without unconserved sides chains):
PDB file :
Tito_4ITQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ITQ-query.scw
PDB file :
Tito_Scwrl_4ITQ.pdb
: