Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILS--NHGPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE
4B8X Chain:A ((4-144))
-----------VPSMAAITSIMRAQQILLGEVDAVVKP--YGLTFARYEALVLLTFSKSGELPMSKIGERLMVHPTSVTNTVDRLVRSGLVAKRPNP----GTLATITDKGREVVEAATRDLMAM-DFGLGAYDAEECGEIFAMLRPLRVAAGDF-------
General information:
TITO was launched using:
RESULT:
Template:
4B8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67213 for 890 contacts (-75.5/contact) +
2D Compatibility (PS) -13967 + (NN) -4733 + (LL) 2044
1D Compatibility (HY) -9200 + (ID) 1500
Total energy: -94569.0 ( -106.26 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_4B8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B8X-query.scw
PDB file :
Tito_Scwrl_4B8X.pdb
: