Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNAHTSVGPLDRAARVYIAGHRGLVGSALLRTFAGAGF--TNLLVRSRAELDLTDRAATFDFVLESRPQVVIDAAARVGGILANDTYPADFLSENLQIQVNLLDAAVAARVPRLLFLGSSCIYPKLAPQPIPESALLTGPLEPTNDAYAIAKIAGILAVQAVRRQHGLPWISAMPTNLYGPGDNFSPSGSHLLPALIRRYDEAKASGAPNVTNWGTGTPRRELLHVDDLASACLYLLEHFD--GPTHVNVGTGIDHTIGEIAEMVASAVGYSGETRWDPSKPDGTPRKLLDVSVLREAGWRPSIA---LRDGIEATVAWYREHAGTVRQ |
4B8W Chain:B ((5-316)) | -----------QSMRILVTGGSGLVGKAIQKVVA----PGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMV---------NLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSA-LTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRT--YLPDFRFTPFKQAVKETCAWFTDNYE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173786 for 2406 contacts (-72.2/contact) +
2D Compatibility (PS) -31817 + (NN) -23294 + (LL) 776
1D Compatibility (HY) -19600 + (ID) 4750
Total energy: -252471.0 ( -104.93 by residue)
QMean score : 0.566
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