Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPTMTSAGWAPGVVQFREYQRRWLRGDVLAGLTVAAYLIPQAMAYATVAGLPPAAGLWASIAPLAIYALLGSSRQLSIGPESATALMTAAVLAPMAAGDLRRYAVLAATLGLLVGLICLLAGTARLGFLASLRSRPVLVGYMAGIALVMISSQLGTITGTSVEGNEFFSEVHSFATSVTRVHWPTFVLAMSVLALLTMLTRWAPRAPGPIIAVLAATMLVAVMSLDAKGIAIVGRIPSGLPTPGVPPVSVEDLRALIIPAAGIAIVTFTDGVLTARAFAARRGQEVNANAELRAVGACNIAAGLTHGFPVSSSSSRTALADVVGGRTQLYSLIALGLVVIVMVFASGLLAMFPIAALGALVVYAALRLIDLSEFRRLARFRRSELMLALATTAAVLGLGVFYGVLAAVALSILELLRRVAHPHDSVLGFVPGIAG-MHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRRALTVV-DQDPGQVEWFVLNAESNVEV-DLTALDALDQ-LRTELLRRGIVFAMARVKQDLRESLRAASLLDKIGEDHIFMTLPTAVQAFRRR---- |
| 3MGL Chain:A ((2-129)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NAEMSYELAQHGRSTLPRELAVYALEGPFFFAAAETFER-----VMGSIQETPQILILRLKW-VPFMDITGIQTLEEMI-QSFHKRGIKVLISGANSRVSQKLVKAGIVKLVGEQNVYPVFEGALSAALTEIEAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86569 for 828 contacts (-104.6/contact) +
2D Compatibility (PS) -13216 + (NN) -8003 + (LL) 37412
1D Compatibility (HY) -8800 + (ID) 1300
Total energy: -80476.0 ( -97.19 by residue)
QMean score : 0.562
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